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  • First record of Ocinebrina nicolai (Mollusca: Gastropoda: Muricidae: Ocenebrinae) in North-Eastern Atlantic waters
    Publication . Afonso, Carlos; Bonomolo, Giuseppe; Monteiro, Pedro; Bentes, Luis; Oliveira, Frederico; Veiga, Pedro; Rangel, Mafalda; Sousa, Inês; Leite, Laura; Gonçalves, J. M. S.
    Ocinebrina nicolai Monterosato, 1884 a marine mollusc belonging to the Muricidae family is reported from Algarve, south coast of Portugal for the first time and is a new record for the biodiversity of the Portuguese malacological fauna and northeastern Atlantic waters. This species with a medium-size shell for the genus (14–16 mm) was initially sampled during a baseline project that studied marine biotopes in the central Algarve region. This short note presents a brief diagnosis of the species, provides local information on geographical distribution, habitat, and compares it with other congeneric species found in Portugal: Ocinebrina aciculata (Lamarck, 1822) and Ocinebrina edwardsii (Payraudeau, 1826).
  • Marxan as a zoning tool for development and economic purposed areas - Aquaculture Management Areas (AMAs)
    Publication . Sales Henriques, Nuno; Monteiro, Pedro; Bentes, Luis; Oliveira, Frederico; Afonso, Carlos; Gonçalves, Jorge Manuel Santos
    The increased number of human activities within the marine environment and the demand for maritime space has increased to a point where in some parts of the globe the demand for maritime space has exceeded the available area. The overlapping objectives and activities have caused severe conflicts among users and with the natural marine environment itself. For that reason, holistic strategies such as Ecosystem Based Management (EBM) and Maritime Spatial Planning (MSP) have been evolved and developed to sustainably manage the marine environment, avoiding conflicts and creating synergies. Spatial analysis tools like Marxan have been used for several years as decision support tools mostly for conservation plans, such as design and establishment of protected areas. In this study we approach the potential of this tool with a different purpose in mind: instead of using the available information of the region for the development of a conservation plan, we used this tool and the available information to select areas to establish Aquaculture Management Areas (AMAs). We also intended to analyse how the existing features of the region would affect the final result of a spatial plan aimed to establish areas for economic and development purposes. We conclude that the use of Marxan can be advantageous to support the planning and development of coastal regions, not only in a conservationist point of view (as it has been mostly used), but also into a developing and economic driven approach. This tool can be particularly useful in regions or situations where there is a large number of stakeholders, ecological and geographical features that could potentially conflict with the establishment, the management and the success of the proposed management areas. (C) 2017 Elsevier Ltd. All rights reserved.
  • Effects of different slipping methods on the mortality of sardine, Sardina pilchardus, after purse-seine capture off the Portuguese Southern coast (Algarve)
    Publication . Marçalo, Ana; Guerreiro, Pedro; Bentes, Luis; Rangel, Mafalda; Monteiro, Pedro; Oliveira, Frederico; Afonso, Carlos; Pousao-Ferreira, Pedro; Benoit, Hugues P.; Breen, Mike; Erzini, Karim; Gonçalves, Jorge Manuel Santos
    The effects of two different slipping methods on the survival, physical and physiological response of sardines, Sardina pilchardus, captured in a purse-seine fishery were investigated in southern Portugal. Sardines were collected and transferred into holding tanks onboard a commercial fishing vessel after being captured, crowded and deliberately released using two slipping procedures: standard and modified. The standard slipping procedure aggregated fish at high densities and made them "roll over" the floatline, while the modified procedure aggregated the fish at moderate densities and enabled them to escape through an opening created by adding weights to the floatline. Both slipping methods were compared with minimally harmed non-slipped sardines (sardines collected from the loose pocket of the purse seine). Survival rates were monitored in captivity over 28 days using three replicates for each treatment. The estimated survival of sardines was 43.6% for the non-slipped fish, 44.7% for the modified slipping and 11.7% for the standard slipping treatments. Scale loss indicated the level of physical impact experienced, with dead fish from the non-slipped and modified slipping technique showing significantly lower scale loss than those fish from the standard slipping treatment within the same period. Of the physiological indicators of stress measured, cortisol, glucose, lactate and osmolality attained peak values during slipping and up to the first hours after introduction to captivity. This work indicates that although delayed mortality after release may be substantial, appropriately modified slipping techniques significantly enhance survival of slipped sardines.
  • Do fisher associations really represent their members’ needs and opinions? The case study of the octopus fishery in the Algarve (south Portugal)
    Publication . Rangel, Mafalda; Pita, Cristina; de Oliveira, Manuela Maria; Guimarães, Maria Helena; Rainha, Rita; Sonderblohm, Carlos; Monteiro, Pedro; Oliveira, Frederico; Ballesteros, Marta; Gonçalves, Jorge Manuel Santos; Pierce, Graham J.; Erzini, Karim
    Fishers’ participation in the fishery management decision-making process is generally low, particularly in small-scale fisheries (SSF). Within the overarching goal of improving fisheries governance, fishers’ participation is crucial. Yet, how can fishers participate in the decision-making processes which affect their actions, and to what extent do fisher associations represent their interests? These questions were tackled by means of an empirical case study in the “Tertúlia do Polvo” project, focusing on the octopus SSF in the Algarve region (south Portugal), where the octopus fishery is managed top-down with sporadic participation of fishers. During the study (2014 and 2015), seven participatory workshops (tertúlias) were held, involving fisher associations, management authorities and researchers, to propose and discuss management measures for the fishery. Also, a face-to-face questionnaire survey (121 valid replies) was undertaken with local fishers to gauge their opinions about the management measures proposed during the workshops. Results show a strong agreement between the outcomes achieved during the workshops and the main concerns and possible solutions identified by fishers. Taking into consideration the difficulty in structuring and assuring a transparent and effective participation of fishers in the management of their activity, the results obtained are promising. In this study, the use of a participatory process (restricted to a small group of stakeholders) combined with consultation (targeting a sample of the fisher population) allowed the validation of the overall results obtained. Such a methodological approach can be tried in other fishing communities to implement efficient and effective collaborative management, contributing to improved fisheries governance.
  • EUNIS habitat's thresholds for the Western coast of the Iberian Peninsula — A Portuguese case study
    Publication . Monteiro, Pedro; Bentes, L.; Oliveira, Frederico; Afonso, Carlos; Rangel, Mafalda; Gonçalves, J. M. S.
    The European Nature Information System (EUNIS) has been implemented for the establishment of a marine European habitats inventory. Its hierarchical classification is defined and relies on environmental variables which primarily constrain biological communities (e.g. substrate types, sea energy level, depth and light penetration). The EUNIS habitat classification scheme relies on thresholds (e.g. fraction of light and energy) which are based on expert judgment or on the empirical analysis of the above environmental data. The present paper proposes to establish and validate an appropriate threshold for energy classes (high, moderate and low) and for subtidal biological zonation (infralittoral and circalittoral) suitable for EUNIS habitat classification of the Western Iberian coast. Kineticwave-induced energy and the fraction of photosynthetically available light exerted on the marine bottom were respectively assigned to the presence of kelp (Saccorhiza polyschides, Laminaria hyperborea and Laminaria ochroleuca) and seaweed species in general. Both data were statistically described, ordered fromthe largest to the smallest and percentile analyseswere independently performed. The threshold between infralittoral and circalittoral was based on the first quartile while the ‘moderate energy’ class was established between the 12.5 and 87.5 percentiles. To avoid data dependence on sampling locations and assess the confidence interval a bootstrap technique was applied. According to this analysis,more than 75% of seaweeds are present at locations where more than 3.65% of the surface light reaches the sea bottom. The range of energy levels estimated using S. polyschides data, indicate that on the IberianWest coast the ‘moderate energy’ areas are between 0.00303 and 0.04385 N/m2 of wave-induced energy. The lack of agreement between different studies in different regions of Europe suggests the need for more standardization in the future. However, the obtained thresholds in the present study will be very useful in the near future to implement and establish the Iberian EUNIS habitats inventory.
  • Marine litter in the upper São Vicente submarine canyon (SW Portugal): abundance, distribution, composition and fauna interactions
    Publication . Oliveira, Frederico; Monteiro, Pedro; Bentes, Luis; Sales Henriques, Nuno; Aguilar, Ricardo; Gonçalves, J. M. S.
    Marine litter has become a worldwide environmental problem, tainting all ocean habitats. The abundance, distribution and composition of litter and its interactions with fauna were evaluated in the upper S. Vicente canyon using video images from 3 remote operated vehicle exploratory dives. Litter was present in all dives and the abundance was as high as 3.31 items100m(-1). Mean abundance of litter over rock bottom was higher than on soft substrate. Mean litter abundance was slightly higher than reported for other canyons on the Portuguese margin, but lower in comparison to more urbanized coastal areas of the world. Lost fishing gear was the prevalent type of litter, indicating that the majority of litter originates from maritime sources, mainly fishing activity. Physical contact with sessile fauna and entanglement of specimens were the major impacts of lost fishing gear. Based on the importance of this region for the local fishermen, litter abundance is expected to increase.
  • The fish fauna of Ampère Seamount (NE Atlantic) and the adjacent abyssal plain
    Publication . Christiansen, Bernd; Vieira, RP; Christiansen, Sabine; Denda, Anneke; Oliveira, Frederico; Gonçalves, J. M. S.
    An inventory of benthic and benthopelagic fishes is presented as a result of two exploratory surveys around Ampe`re Seamount, between Madeira and the Portuguese mainland, covering water depths from 60 to 4,400 m. A total of 239 fishes were collected using different types of sampling gear. Three chondrichthyan species and 31 teleosts in 21 families were identified. The collections showed a vertical zonation with little overlap, but indications for an affinity of species to certain water masses were only vague. Although most of the species present new records for Ampe`re Seamount, all of them have been known for the NE Atlantic; endemic species were not found. The comparison with fish communities at other NE Atlantic seamounts indicates that despite a high ichthyofaunal similarity, which supports the ‘‘stepping stone’’ hypothesis of species dispersal, some differences can be attributed to the local features of the seamounts.
  • Deployment characterization of a floatable tidal energy converter on a tidal channel, Ria Formosa, Portugal
    Publication . Pacheco, André; G-Gorbeña, Eduardo; Plomaritis, Haris; Garel, Erwan; Gonçalves, J. M. S.; Bentes, L.; Monteiro, P.; Afonso, Carlos; Oliveira, Frederico; Soares, C.; Zabel, F.; Sequeira, Claudia
    This paper presents the results of a pilot experiment with an existing tidal energy converter (TEC), Evopod 1 kW floatable prototype, in a real test case scenario (Faro Channel, Ria Formosa, Portugal). A baseline marine geophysical, hydrodynamic and ecological study based on the experience collected on the test site is presented. The collected data was used to validate a hydro-morphodynamic model, allowing the selection of the installation area based on both operational and environmental constraints. Operational results related to the description of power generation capacity, energy capture area and proportion of energy flux are presented and discussed, including the failures occurring during the experimental setup. The data is now available to the scientific community and to TEC industry developers, enhancing the operational knowledge of TEC technology concerning efficiency, environmental effects, and interactions (i.e. device/environment). The results can be used by developers on the licensing process, on overcoming the commercial deployment barriers, on offering extra assurance and confidence to investors, who traditionally have seen environmental concerns as a barrier, and on providing the foundations whereupon similar deployment areas can be considered around the world for marine tidal energy extraction.
  • First record of Calcinus tubularis on the southern coast of Portugal (Crustacea: Decapoda: Anomura: Diogenidae)
    Publication . Oliveira, Frederico; Monteiro, Pedro; Afonso, Carlos; Veiga, Pedro; Bentes, Luis; Calado, Ricardo; Gonçalves, J. M. S.
    Twenty-five specimens of the hermit crab Calcinus tubularis were observed during SCUBA dives for fauna and flora assessment in the shallow rocky reefs of the southern coast of Portugal between 2003 and 2008. Of the specimens observed, only one specimen used a tube gallery, while the others occupied unidentified gastropod shells with strong bio-cover. Calcinus tubularis is here recorded from the mainland Portuguese coast for the first time. This is the first record of the species in European coastal waters outside the Mediterranean Sea (excluding the Atlantic Islands) and extends the known geographical distribution of the species further north in the north-eastern Atlantic.
  • Relatório de actividade profissional
    Publication . Oliveira, Frederico; Gonçalves, J. M. S.
    O presente relatório de atividade profissional documenta as principais atividades técnicas e científicas desenvolvidas por Frederico Miguel Cunha de Oliveira ao longo do seu percurso profissional- O relatório procura demonstrar que o autor, Licenciado em Biologia Marinha e Pescas no ramo de Biologia Marinha pela Faculdade de Ciências do Mar e Ambiente da Universidade do Algarve, possui experiência profissional relevante que lhe permite, através da avaliação em prova pública deste documento e ao abrigo do despacho reitoral RT 33/2011, cumprir os requisitos para obtenção do grau de Mestre em Biologia Marinha. O autor iniciou a sua atividade profissional como bolseiro de investigação em 2004 e, desde então, tem estado envolvido em vários projetos científicos envolvendo investigadores e instituições de várias contribuindo com o seu trabalho e conhecimento em áreas diversificadas que incluem a ecologia das comunidades, a taxonomia, a caracterização e mapeamento biológico dos fundos marinhos, a avaliação de impactes de atividades humanas nas zonas marinhas costeiras ou a utilização de veículos operados remotamente para o estudo dos oceanos. Para além das atividades desenvolvidas enquanto investigador nos projetos em que esteve envolvido, o autor tem vindo a adquirir competências em outras áreas da actividade científica como a disseminação da ciência ou a ilustração cientifica, sendo hoje o principal responsável pelo conteúdo gráfico dos documentos e apresentações produzidas pelo grupo de investigação onde desenvolve a sua actividade. A participação e colaboração nos diversos projetos de investigação e de ciência aplicada nacionais e internacionais, resultou na publicação de ló artigos científicos em jomais com arbitragem científica, 3 artigos em conferências, 47 relatórios técnicos, 7 livros, 50 comunicações em encontros científicos, participação em 9 exposições e outras ações de divulgação.