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- Using remote sensing as a support to the implementation of the European Marine Strategy Framework Directive in SW PortugalPublication . Cristina, Sónia; Icely, John; Goela, Priscila; Angel DelValls, Tomás; Newton, AliceThe exclusive economic zones (EEZ) of coastal countries are coming under increasing pressure from various economic sectors such as fishing, aquaculture, shipping and energy production. In Europe, there is a policy to expand the maritime economic sector without damaging the environment by ensuring that these activities comply with legally binding Directives, such as the Marine Strategy Framework Directive (MSFD). However, monitoring an extensive maritime area is a logistical and economic challenge. Remote sensing is considered one of the most cost effective, methods for providing the spatial and temporal environmental data that will be necessary for the effective implementation of the MSFD. However, there is still a concern about the uncertainties associated with remote sensed products. This study has tested how a specific satellite product can contribute to the monitoring of a MSFD Descriptor for "good environmental status" (GES). The results show that the quality of the remote sensing product Algal Pigment Index 1 (API 1) from the MEdium Resolution Imaging Spectrometer (MERIS) sensor of the European Space Agency for ocean colour products can be effectively validated with in situ data from three stations off the SW Iberian Peninsula. The validation results show good agreement between the MERIS API 1 and the in situ data for the two more offshore stations, with a higher coefficient of determination (R-2) of 0.79, and with lower uncertainties for the average relative percentage difference (RPD) of 24.6% and 27.9% and a root mean square error (RMSE) of 0.40 and 0.38 for Stations B and C, respectively. Near to the coast, Station A has the lowest R-2 of 0.63 and the highest uncertainties with an RPD of 112.9% and a RMSE of 1.00. It is also the station most affected by adjacency effects from the land: when the Improved Contrast between Ocean and Land processor (ICOL) is applied the R-2 increases to 0.77 and there is a 30% reduction in the uncertainties estimated by RPD. The MERIS API 1 product decreases from inshore to offshore, with higher values occurring mainly between early spring and the end of the summer, and with lower values during winter. By using the satellite images for API 1, it is possible to detect and track the development of algal blooms in coastal and marine waters, demonstrating the usefulness of remote sensing for supporting the implementation of the MSFD with respect to Descriptor 5: Eutrophication. It is probable that remote sensing will also prove to be useful for monitoring other Descriptors of the MSFD.
- Evaluation of eutrophication in the Ria Formosa coastal lagoon, PortugalPublication . Newton, Alice; Icely, John; Falcão, Manuela; Nobre, A.; Nunes, J.; Ferreira, J.; Vale, C.The Ria Formosa is a shallow mesotidal lagoon on the south coast of Portugal, with natural biogeochemical cycles essentially regulated by tidal exchanges at the seawater boundaries and at the sediment interface. Existing data on nutrients in the water column and the sediment, together with chlorophyll a and oxygen saturation in the water column,compared using different models for assessing eutrophication. The European Environmental Agency criteria are based on the comparison of nutrient concentrations which indicate that the situation in the Ria Formosa is ‘‘poor’’ to ‘‘bad’’. In contrast, the United States Estuarine Eutrophication Assessment is based on symptoms, including high chlorophyll a and low oxygen saturation, which indicate that the Ria Formosa is near pristine. Despite these contradictions, a preliminary assessment by Driving forces, Pressures, State, Impact, Reponses(DPSIR) of eutrophication demonstrate the potential for episodic eutrophic conditions from treated and untreated domestic effluent as well as from non-point source agricultural run off. Sediments are also an important source of nutrients in the lagoon, but their contribution to potential eutrophic conditions is unknown.
- The yield of microphytobenthic chlorophyll from nutrients: enriched experiments in microcosmsPublication . Brito, Ana; Newton, Alice; Tett, Paul; Icely, John; Fernandes, TeresaThe yield of phytoplankton chlorophyll from nitrogen is a useful parameter in the study of eutrophication of coastal waters, providing the link between chlorophyll formation and nutrient consumption. This parameter has been estimated for microphytobenthos from Ria Formosa lagoon on the south coast of Portugal with a series of three experiments conducted in May and September 2007. Six sediment cores were collected from Ria Formosa in acrylic cylinders and cork stoppers were placed in the bottom. Water samples were collected in large containers and prepared (filtered and enriched) to be pumped to the top of the sediment inside the acrylic cylinders, which are the microcosms of the experiments. Microcosms were isolated to avoid water exchanges and placed in large tanks full of water to maintain temperature stability. Experiments were run for 5 to 9 days in a continuous diluted nutrient enriched system. One of the experiments was carried out with half the microcosms in the dark to evaluate the nutrient fluxes between the sediment and the water column, when no algal growth is expected. Nutrient fluxes of muddy sediments, during the two last days of the experiment in the dark were estimated to be 0.1015 μmol cm−2d−1 for nitrogen, −0.0015 μmol cm−2d−1 for phosphorus, and 0.1395 μmol cm−2d−1 for silicon. The yield of chlorophyll was determined to be between 3.65 and 4.11 μg chl (μmol N)−1 from nitrogen and between 4.03 and 4.77 μg chl (μmol Si)−1 for silicon in muddy sediments. It was not possible to determine the yield from phosphorus. These values are higher than for phytoplankton which may be due to physiological reasons, or due to the presence of a smaller fraction of microheterotrophs, which would divert nutrients. For sand, smaller yields were obtained but it is likely that this was mainly due to the fact that the values of the sediment fluxes used were the ones obtained for mud, which are higher than they should be for sand. This extra input of nutrients is considered to be taken up by algae, thereby decreasing the value of the yield. Therefore, reliable chlorophyll yield estimates for sand could not be obtained.
- Phytoplankton dynamics in southern Portuguese coastal lagoons during a discontinuous period of 40 yearsPublication . Brito, Ana; Quental, Teresa; Coutinho, Teresa; Branco, Maria; Falcão, Manuela; Newton, Alice; Icely, John; Moita, TeresaShallow coastal lagoons in southern Portugal, such as the Ria Formosa and Alvor, are considered to be highly important both ecologically and economically. Given the impact of phytoplankton in the ecosystem productivity, it is important to understand its dynamics and to consider them for the assessment of ecosystem health. All available phytoplankton data(chlorophyll a; selected species composition and abundance) within the period from 1967 to 2011 were compiled within the framework of a project to implement the Water Framework Directive. Chlorophyll a (chl a)measurements in Ria Formosa from 1967 to 1968, 1985 to 1986, 1991 to 1992, 2006 to 2008, and 2010 show similar monthly averages with some exceptions. In the 80’s the monthly averages were less than half of what was observed in the 60’s. In the 90’s, the chl a concentrations increased significantly and in the period from 2006 to 2010, chl a concentrations ranged between the values found in the 80’s. The decrease in chl a concentrations during the 80’s is likely to be associated with a peak in shellfish production. Shellfish production was recorded to have decreased from 1990 onwards. Chl concentrations in Ria de Alvor are found to vary within the same range as in Ria Formosa. However, data are limited and does not allow a detailed historical comparison. During the most important chl a peaks, the phytoplankton community was characterized by coastal species, such as Pseudo-nitzschia sp., which may be associated with upwelling events. This was found in Ria Formosa both in the 90’s and from 2000 onwards, as well as in the most recent data from Ria de Alvor. This clearly indicates the influence of the coastal dynamics in these lagoons. High chl outside the lagoon confirmed the influence of coastal waters. In addition, high chl concentrations were also observed at inner parts of the lagoon but not outside, suggesting the existence of an interior maximum. The community was mainly characterized by the existence of low salinity tolerant species, such as Kryptoperidinium foliaceum. Over the time intervals in this study, the 90th percentile values of chlorophyll a concentrations were 3.0 in Ria Formosa and 2.6 mg m 3 in the Ria de Alvor. In a five-fold classification of ecological quality from High to Bad, we propose chlorophyll a concentrations of 5.3 mg m 3 as a reference value, 8 mg m 3 for the boundary High/Good, and 12 mg m 3 for the boundary Good/Moderate. According to this, all water bodies were considered as in High status.
- The yield of chlorophyll from nitrogen: a comparison between the shallow Ria Formosa lagoon and the deep oceanic conditions at Sagres along southern coast of PortugalPublication . Edwards, Vivien; Icely, John; Newton, Alice; Webster, RuthThe yield of chlorophyll from dissolved inorganic nitrogen (DIN) has been shown to be a potentially useful parameter for predicting eutrophication, particularly, in the northerly, coastal waters of the North East Atlantic (NEA). This study investigates whether this parameter might also be appropriate for the southerly, coastal waters of the NEA. Nitrogen enrichment experiments were carried out using microcosms to determine the microplanktonic yield of chlorophyll from DIN in waters from the Ria Formosa (April 2002) and from Sagres (September 2002) on the south coast of Portugal. Continuous culture techniques enabled experiments to be run for 7 days after enrichment so that changes in the cumulative yield over time could be calculated. Yields from the Sagres experiment were consistently higher than those from the Ria Formosa experiment, with respective maximum yields of 4.7 and 2.1 mg chl (mmol N) 1, and respective steady-state yields of 3.1 and 0.9 mg chl (mmol N) 1. In addition, regressions carried out on historical data sets from the two study sites showed poor correlation between chlorophyll and nitrate. Other differences between the microcosm experiments at the two sites, included: background concentrations of DIN, silicate and phosphate that were, respectively, 5.6 mM, 8.1 mM, and 0.3 mMhigher in the Ria; chlorophyll concentrations at Sagres that were double those of the Ria; accumulation of particulate nitrogen that was both more rapid and more substantial at Sagres; a different community structure for the diatoms at the two sites; more numerous autotrophic dinoflagellates, flagellates and cyanobacteria, as well as more numerous protozoan grazers, at Sagres. These differences may explain why the yield of chlorophyll from DIN at Sagres is one of the highest reported in the literature. This yield parameter requires further study under a range of seasonal conditions and with a range of microplankton communities before it could be considered useful for predicting eutrophication throughout the coastal waters of the NEA.
- Management of coastal eutrophication: integration of field data, ecosystem-scale simulations and screening modelsPublication . Nobre, A.; Ferreira, J.; Newton, Alice; Simas, T.; Icely, John; Neves, R.A hybrid approach for eutrophication assessment in estuarine and coastal ecosystems is presented. The ASSETS screening model (http://www.eutro.org) classifies eutrophication status into five classes: High (better), Good, Moderate, Poor and Bad (worse). This model was applied to a dataset from a shallow coastal barrier island system in southwest Europe (Ria Formosa), with a resulting score of Good. A detailed dynamic model was developed for this ecosystem, and the outputs were used to drive the screening model. Four scenarios were run on the research model: pristine, standard (simulates present loading), half and double the current nutrient loading. The Ria Formosa has a short water residence time and eutrophication symptoms are not apparent in the water column. However, benthic symptoms are expressed as excessive macroalgal growth and strong dissolved oxygen fluctuations in the tide pools. The standard simulation results showed an ASSETS grade identical to the field data application. The application of the screening model to the other scenario outputs showed the responsiveness of ASSETS to changes in pressure, state and response, scoring a grade of High under pristine conditions, Good for half the standard scenario and Moderate for double the present loadings. The use of this hybrid approach allows managers to test the outcome of measures against a set of well-defined metrics for the evaluation of state. It additionally provides a way of testing and improving the pressure component of ASSETS. Sensitivity analysis revealed that sub-sampling the output of the research model at a monthly scale, typical for the acquisition of field data, may significantly affect the outcome of the screening model, by overlooking extreme events such as occasional night-time anoxia in tide pools.