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Rapid identification of differentially expressed genes by in situ screening of bacteria

dc.contributor.authorFonseca, V. G.
dc.contributor.authorLago-Lestón, Asunción
dc.contributor.authorLaizé, Vincent
dc.contributor.authorCancela, Leonor
dc.date.accessioned2014-06-13T14:42:51Z
dc.date.available2014-06-13T14:42:51Z
dc.date.issued2005-06
dc.date.updated2014-06-03T10:00:13Z
dc.description.abstractThe identification of differentially expressed genes is a key step in the understanding of specific molecular mechanisms. Various methods have been developed to search for differences in expression but most of them are time or money consuming. We present here an alternative technique that connects standard suppression subtractive hybridization with in situ screening of bacteria to isolate and identify differentially expressed transcripts. The in situ differential screening is based on the transfer of bacteria directly from cultures onto nylon membranes with no need of phenol/chloroform extraction, colony lifting, or polymerase chain reaction amplification. This improved method was successfully applied and must be seen as a simple, low-cost, time-saving, and reproducible approach to identify differentially expressed genes.por
dc.identifier.citationFonseca VG; Lago-Lestón A; Laizé V; Cancela ML. Rapid identification of differentially expressed genes by in situ screening of bacteria, Molecular Biotechnology, 30, 2, 163-165, 2005.por
dc.identifier.doihttp://dx.doi.org/ 10.1385/MB:30:2:163
dc.identifier.issn1073-6085
dc.identifier.otherAUT: LCA00739;
dc.identifier.urihttp://hdl.handle.net/10400.1/4307
dc.language.isoengpor
dc.peerreviewedyespor
dc.publisherHumana Presspor
dc.relation.publisherversionhttp://link.springer.com/article/10.1385%2FMB%3A30%3A2%3A163por
dc.subjectDifferentially expressed genespor
dc.subjectSuppression subtractive hybridization (SSH)por
dc.titleRapid identification of differentially expressed genes by in situ screening of bacteriapor
dc.typejournal article
dspace.entity.typePublication
oaire.citation.endPage165por
oaire.citation.issue2por
oaire.citation.startPage163por
oaire.citation.titleMolecular Biotechnologypor
oaire.citation.volume30por
person.familyNameLago-Lestón
person.familyNameLaizé
person.familyNameCancela
person.givenNameAsunción
person.givenNameVincent
person.givenNameM. Leonor
person.identifier.orcid0000-0003-4361-7732
person.identifier.orcid0000-0001-9565-9198
person.identifier.orcid0000-0003-3114-6662
person.identifier.ridB-4463-2008
person.identifier.scopus-author-id57193972525
person.identifier.scopus-author-id6602982778
rcaap.rightsrestrictedAccesspor
rcaap.typearticlepor
relation.isAuthorOfPublicationcf3375ea-836f-4de2-9cd6-fde518b26838
relation.isAuthorOfPublicationb51cd3d5-7ee4-47d8-9bc4-b3e297aa222f
relation.isAuthorOfPublicationb9bbfe32-3dfe-4131-ad14-a4394008447f
relation.isAuthorOfPublication.latestForDiscoveryb51cd3d5-7ee4-47d8-9bc4-b3e297aa222f

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