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European marine omics biodiversity observation network: a strategic outline for the implementation of omics approaches in ocean observation

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dc.contributor.authorSanti, Ioulia
dc.contributor.authorBeluche, Odette
dc.contributor.authorBeraud, Mélanie
dc.contributor.authorButtigieg, Pier Luigi
dc.contributor.authorCasotti, Raffaella
dc.contributor.authorCox, Cymon J.
dc.contributor.authorCunliffe, Michael
dc.contributor.authorDavies, Neil
dc.contributor.authorde Cerio, Oihane Diaz
dc.contributor.authorExter, Katrina
dc.contributor.authorKervella, Anne Emmanuelle
dc.contributor.authorKotoulas, Georgios
dc.contributor.authorLagaisse, Rune
dc.contributor.authorLaroquette, Arnaud
dc.contributor.authorLouro, Bruno
dc.contributor.authorNot, Fabrice
dc.contributor.authorObst, Matthias
dc.contributor.authorPavloudi, Christina
dc.contributor.authorPoulain, Julie
dc.contributor.authorPræbel, Kim
dc.contributor.authorVanaverbeke, Jan
dc.contributor.authorPade, Nicolas
dc.date.accessioned2023-06-30T12:25:31Z
dc.date.available2023-06-30T12:25:31Z
dc.date.issued2023
dc.description.abstractMarine ecosystems, ranging from coastal seas and wetlands to the open ocean, accommodate a wealth of biological diversity from small microorganisms to large mammals. This biodiversity and its associated ecosystem function occurs across complex spatial and temporal scales and is not yet fully understood. Given the wide range of external pressures on the marine environment, this knowledge is crucial for enabling effective conservation measures and defining the limits of sustainable use. The development and application of omics-based approaches to biodiversity research has helped overcome hurdles, such as allowing the previously hidden community of microbial life to be identified, thereby enabling a holistic view of an entire ecosystem's biodiversity and functioning. The potential of omics-based approaches for marine ecosystems observation is enormous and their added value to ecosystem monitoring, management, and conservation is widely acknowledged. Despite these encouraging prospects, most omics-based studies are short-termed and typically cover only small spatial scales which therefore fail to include the full spatio-temporal complexity and dynamics of the system. To date, few attempts have been made to establish standardised, coordinated, broad scaled, and long-term omics observation networks. Here we outline the creation of an omics-based marine observation network at the European scale, the European Marine Omics Biodiversity Observation Network (EMO BON). We illustrate how linking multiple existing individual observation efforts increases the observational power in large-scale assessments of status and change in biodiversity in the oceans. Such large-scale observation efforts have the added value of cross-border cooperation, are characterised by shared costs through economies of scale, and produce structured, comparable data. The key components required to compile reference environmental datasets and how these should be linked are major challenges that we address.pt_PT
dc.description.sponsorshipLA/P/0101/2020pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.doi10.3389/fmars.2023.1118120pt_PT
dc.identifier.eissn2296-7745
dc.identifier.urihttp://hdl.handle.net/10400.1/19782
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherFrontiers Mediapt_PT
dc.relationAlgarve Centre for Marine Sciences
dc.relationAlgarve Centre for Marine Sciences
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/pt_PT
dc.subjectOmicspt_PT
dc.subjectMarine biodiversitypt_PT
dc.subjectOcean observationpt_PT
dc.subjectWater columnpt_PT
dc.subjectSoft substratept_PT
dc.subjectHard substratept_PT
dc.subjectMetagenomicspt_PT
dc.subjectMetabarcodingpt_PT
dc.titleEuropean marine omics biodiversity observation network: a strategic outline for the implementation of omics approaches in ocean observationpt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.awardTitleAlgarve Centre for Marine Sciences
oaire.awardTitleAlgarve Centre for Marine Sciences
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04326%2F2020/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDP%2F04326%2F2020/PT
oaire.citation.titleFrontiers in Marine Sciencept_PT
oaire.citation.volume10pt_PT
oaire.fundingStream6817 - DCRRNI ID
oaire.fundingStream6817 - DCRRNI ID
person.familyNameCox
person.familyNameLouro
person.givenNameCymon
person.givenNameBruno
person.identifier.ciencia-id6B15-9771-1D04
person.identifier.orcid0000-0002-4927-979X
person.identifier.orcid0000-0001-8164-581X
person.identifier.ridD-1303-2012
person.identifier.scopus-author-id7402112716
person.identifier.scopus-author-id16028940200
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsopenAccesspt_PT
rcaap.typearticlept_PT
relation.isAuthorOfPublication82c3689c-60b6-440d-9d7b-49e6dbd6861b
relation.isAuthorOfPublication3b22b64f-ba2d-4c42-8bf9-34b569eb7b6c
relation.isAuthorOfPublication.latestForDiscovery3b22b64f-ba2d-4c42-8bf9-34b569eb7b6c
relation.isProjectOfPublicationfafa76a6-2cd2-4a6d-a3c9-772f34d3b91f
relation.isProjectOfPublication15f91d45-e070-47d8-b6b8-efd4de31d9a8
relation.isProjectOfPublication.latestForDiscoveryfafa76a6-2cd2-4a6d-a3c9-772f34d3b91f

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