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Characterization of 12 polymorphic microsatellite markers in the sugar kelp Saccharina latissima

2016-10Journal article Restricted access
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dc.contributor.authorPaulino, Cristina
dc.contributor.authorNeiva, J.
dc.contributor.authorCoelho, Nelson C.
dc.contributor.authorAires, Tânia
dc.contributor.authorMarba, Núria
dc.contributor.authorKrause-Jensen, Dorte
dc.contributor.authorSerrão, Ester
dc.date.accessioned2017-04-07T15:55:57Z
dc.date.available2017-04-07T15:55:57Z
dc.date.issued2016-10
dc.description.abstractSaccharina latissima is an ecologically and economically important kelp species native to the coastal regions of the Northern Hemisphere. This species has considerable phylogeographic structure and morphological plasticity, but lack of resolution of available genetic markers prevents a finer characterization of its genetic diversity and structure. Here, we describe 12 microsatellite loci identified in silico in a genomic library, and assess their polymorphism in three distant populations. Allelic richness at the species level was relatively high (5-23 alleles per locus), as was gene diversity within populations (0.42 < H (E) < 0.62). In addition, individuals readily form distinct genotypic clusters matching their populations of origin. The variation detected confirms the great potential of these markers to investigate the biogeography and population dynamics of S. latissima, and to better characterize its genetic resources for the establishing farming industry.
dc.identifier.doi10.1007/s10811-016-0811-x
dc.identifier.issn0921-8971
dc.identifier.otherAUT: ESE00527;
dc.identifier.urihttp://hdl.handle.net/10400.1/9268
dc.language.isoeng
dc.peerreviewedyes
dc.relationExtant or extinct tipping points - climate changes drive genetic diversity and dynamics of range edge populations as evolutionary hotspots
dc.relation.isbasedonWOS:000383569600042
dc.titleCharacterization of 12 polymorphic microsatellite markers in the sugar kelp Saccharina latissima
dc.typejournal article
dspace.entity.typePublication
oaire.awardTitleExtant or extinct tipping points - climate changes drive genetic diversity and dynamics of range edge populations as evolutionary hotspots
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/3599-PPCDT/EXCL%2FAAG-GLO%2F0661%2F2012/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/SFRH/SFRH%2FBPD%2F88935%2F2012/PT
oaire.citation.endPage3074
oaire.citation.issue5
oaire.citation.startPage3071
oaire.citation.titleJournal of Applied Phycology
oaire.citation.volume28
oaire.fundingStream3599-PPCDT
oaire.fundingStreamSFRH
person.familyNamePaulino
person.familyNameMiranda Neiva
person.familyNameCoelho
person.familyNameAires
person.familyNameSerrao
person.givenNameCristina
person.givenNameJoão
person.givenNameNelson
person.givenNameTania
person.givenNameEster A.
person.identifierM-3818-2013
person.identifier282868
person.identifierC-6686-2012
person.identifier.ciencia-id1C1E-B852-4086
person.identifier.ciencia-id191B-5464-41F5
person.identifier.ciencia-id4318-9E2C-32B9
person.identifier.ciencia-id5B13-B26E-B1EC
person.identifier.orcid0000-0001-8637-545X
person.identifier.orcid0000-0002-5927-4570
person.identifier.orcid0000-0002-8331-5889
person.identifier.orcid0000-0002-1964-6819
person.identifier.orcid0000-0003-1316-658X
person.identifier.ridM-4126-2013
person.identifier.ridM-8306-2013
person.identifier.scopus-author-id55892980300
person.identifier.scopus-author-id54895771800
person.identifier.scopus-author-id26029686700
person.identifier.scopus-author-id7004093604
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsrestrictedAccess
rcaap.typearticle
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