Browsing by Author "Joaquim, Sandra"
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- Biology and hatchery production of Chamelea gallina, Spisula solida and Venerupis corrugata, to support restocking and stock enhancement programsPublication . Joaquim, Sandra; Chícharo, Luís; Gaspar, Miguel José BaptistaDespite the management measures introduced by the fisheries administration to adjust catches in order to ensure the conservation of the stocks, beds of Spisula solida, Chamelea gallina and Venerupis corrugata in Algarve show evident signs of depletion. To reverse this negative trends an active intervention may be necessary in order to restore the populations of those three species. The present thesis aimed to increase the knowledge on the biological processes and hatchery production of these species, to support future restocking/stock enhancement programs for wild stock management as well as to promote them as candidates for the shellfish aquaculture industry, encouraging the diversification in this activity. To achieve this objective, first the best founder population for aquaculture purposes was defined, for each species, in order to contribute to the conservation of the genetic variability of the target wild populations to be restocked. Thereafter, the optimal reproductive time of the species for artificial spawning induction in aquaculture was defined, based on the characterization of the reproductive cycle of the three studied species as well as its nutrient storage and exploitation strategy. Particular emphasis was given to the evaluation of any eventual relationships between the broodstock condition, oocytes quality and the larval viability of V. corrugata. The introduction of the new species C. gallina and S. solida in aquaculture was based on the existing Batch technology. However, the production of V. corrugata larvae was evaluated in an optimized laboratory-scale recirculating aquaculture system and compared with the traditional larval rearing system. Furthermore, a pilot experiment was designed to determine the feasibility of a stock-enhancement strategy, which consisted of transplanting individuals of S. solida from natural clam beds to a closed fishing area. Finally, the main results of this thesis encourage the diversification of aquaculture as a way to promote this activity and to support future restocking and stock enhancement programs for the target species.
- Bycatch and discard survival rate in a small-scale bivalve dredge fishery along the Algarve coast (southern Portugal)Publication . Anjos, Mariana; Pereira, Fábio; Vasconcelos, Paulo; Joaquim, Sandra; Matias, Domitília; Erzini, Karim; Gaspar, MiguelAlthough the bivalve dredge used on the Algarve coast (southern Portugal) is highly selective for the target species, in some periods of the year the bycatch can exceed the catch of the commercial species. The present study aimed to quantify the bycatch and discards, estimate damage and mortality, and propose management measures to minimize discards and mortality. A total of 15 fishing surveys (60 tows) were performed using two types of dredges (“DDredge” targeting Donax trunculus and “SDredge” targeting Spisula solida and Chamelea gallina). Of the 85257 individuals (392.4 kg) of 52 taxa that were caught, 73.4% belonged to the target species, 22.1% to commercially undersized target species and 4.5% to bycatch species. Bycatch rates were lower for SDredge (13.5% in number and 6.3% in weight) than for DDredge (46.0% in number and 32.9% in weight). Damage and mortality rates were also lower using SDredge (1.3% and 1.0% of the total catches, respectively) than using DDredge (4.0% and 2.8% of the total catches). Survival experiments revealed the diverse vulnerability of the taxa and confirmed the influence of the damage score on the mortality rate. The results gathered in the present study encourage the adoption of a bycatch reduction device to reduce both direct and indirect mortality.
- Calcification, growth and mortality of juvenile clams Ruditapes decussatus under increased pCO(2) and reduced pH: variable responses to ocean acidification at local scales?Publication . Range, Pedro; Chicharo, Alexandra Maria; Ben-Hamadou, Radhouan; Piló, David; Matias, Domitília; Joaquim, Sandra; Oliveira, A. P.; Chícharo, LuísWe investigated the effects of ocean acidification on juvenile clams Ruditapes decussatus (average shell length 10.24 mm) in a controlled CO2 perturbation experiment. The carbonate chemistry of seawater was manipulated by diffusing pure CO2, to attain two reduced pH levels (by −0.4 and −0.7 pH units), which were compared to unmanipulated seawater. After 75 days we found no differences among pH treatments in terms of net calcification, size or weight of the clams. The naturally elevated total alkalinity of local seawater probably contributed to buffer the effects of increased pCO2 and reduced pH. Marine organisms may, therefore, show diverse responses to ocean acidification at local scales, particularly in coastal, estuarine and transitional waters, where the physical–chemical characteristics of seawater are most variable. Mortality was significantly reduced in the acidified treatments. This trend was probably related to the occurrence of spontaneous spawning events in the control and intermediate acidification treatments. Spawning, which was unexpected due to the small size of the clams, was not observed for the pH −0.7 treatment, suggesting that the increased survival under acidified conditions may have been associated with a delay in the reproductive cycle of the clams. Future research about the impacts of ocean acidification on marine biodiversity should be extended to other types of biological and ecological processes, apart from biological calcification.
- Comparative study on cellular and molecular responses in oyster sperm revealed different susceptibilities to cryopreservationPublication . F RIESCO, MARTA; Félix, Francisca; Matias, Domitilia; Joaquim, Sandra; Suquet, Marc; Cabrita, ElsaThe Portuguese (Crassostrea angulata) and Pacific oyster (Crassostrea gigas), both from the genus Crassostrea, are two important species for production and conservation. Although they have common characteristics, different susceptibilities to rearing conditions have been described in these species. Overall, in the case of C. angulata, only a few remaining populations are present in the south of Portugal and Spain. The preservation of genetic material from improved stocks or from the original population is crucial in oysters to prevent the potential impacts of epidemic diseases and natural disasters. Sperm cryopreservation in oysters has progressed in recent years. However many issues, such as protocol standardization, are still unsolved for the application of research results. In the present study a sperm cryopreservation protocol, previously published in C. angulata by our group, were analyzed in terms of cellular and molecular damage, in an effort to determine the most sensible parameters to standardize the cryopreservation protocols for both species. Different approaches in the analysis of sperm quality were performed for the first time in this genus to detect different susceptibilities between the two valuable species. Our results revealed that our previously published protocol containing 10% DMSO as cryoprotectant is more suitable comparing to 10% EG in both species. In addition, an integrative analysis was performed in both oyster species comparing all cellular parameters and C. gigas showed a higher susceptibility to cryopreservation using this optimized protocol. Moreover, higher susceptibility to transcript degradation was detected in C. gigas using this optimized cryopreservation protocol. This study highlights the importance of using different techniques and exhaustive analyses for selecting the most suitable cryopreservation protocol and its standardization, thus ensuring the total safety of the technique.
- First study in cryopreserved Crassostrea angulata spermPublication . F RIESCO, MARTA; Félix, Francisca; Matias, Domitilia; Joaquim, Sandra; Suquet, Marc; Cabrita, ElsaSperm cryopreservation is a widely employed technique that promotes alternative techniques to contribute to broodstock management or restoration programs for species of commercial interest, endangered species or species with an interesting genotype. The preservation of genetic material from improved stocks or from the original population is extremely important for the oyster aquaculture industry to prevent the potential impacts of epidemic diseases and natural disasters. The Portuguese oyster, Crassostrea angulata, was the most important species commercialized by the shellfish industry. However, inadequate management of this industry and pathology occurrences resulted in a significant decrease in natural populations. For this reason, in this work a successful sperm cryopreservation protocol for this important species has been developed for the first time. Different internal cryoprotectants (DMSO, ethylene glycol, polyethylene glycol and methanol) at several concentrations (5, 10, 20%), containers (straws vs cryovials) and freezing rates (slow and fast rates) were tested. Cryoprotectant toxicity tests corroborated that this assay did not take into account the following steps of cryopreservation protocol as sperm agglutination. A fast freezing rate of cells diluted in 10% DMSO and the use of straws as containers were the best cryopreservation conditions for Portuguese oyster sperm. Finally, fertilization assays confirmed the efficiency of the cryopreservation protocol in oyster sperm. These results demonstrated that different susceptibilities have been detected concerning sperm cryopreservation depending on oyster species or genetic material composition. (C) 2016 Elsevier Inc. All rights reserved.
- Genetic diversity of two Portuguese populations of the pullet carpet shell Venerupis senegalensis, based on RAPD markers: contribution to a sustainable restocking programPublication . Joaquim, Sandra; Pereira, Jorge C.; Leitão, Alexandra; Matias, Domitília; Chaves, Raquel; Guedes-Pinto, Henrique; Chícharo, Luís; Gaspar, MiguelThe pullet carpet shell Venerupis senegalensis (=V. pullastra) is a commercially important species in Portugal, Spain, France, and Italy. In Portugal, this species was once abundant in the Ria Formosa (southern Portugal)
- Larval hatching and development of the wedge shell (Donax trunculus L.) under increased CO2 in southern PortugalPublication . Pereira, Alexandre Miguel; Range, Pedro; Campoy, Ana; Oliveira, Ana Paula; Joaquim, Sandra; Matias, Domitília; Chícharo, Luís; Gaspar, MiguelNoticeable changes in global temperatures, climate and ocean carbon chemistry are the result of carbon dioxide increase in the atmosphere. This increase has been mitigated by the oceans capacity to absorb one-fourth of the carbon dioxide in the atmosphere, although this CO2 intake affects oceans carbonate chemistry [i.e., ocean acidification-(OA)]. The detrimental effect of OA in the development and shell formation has been studied in several species of bivalves, although no information is available on the wedge shell Donax trunculus, a gastronomically appreciated species and an important economical resource in several southern European countries. We evaluated the effect of pCO(2) increase on hatching and early life stages of D. trunculus, considering two ocean acidification scenarios (Delta pH -0.3 and Delta pH -0.6). Our results showed that elevated pCO(2) caused a delay in hatching into D-larvae and reduced larvae survival. In the extreme scenario (Delta pH -0.6), some trochophore larvae persisted to day 9 of the experiment and more abnormal larvae were produced than in the Delta pH -0.3 and control treatments. At day 5, normal veligers under extreme acidification were smaller than in other treatments, but by day 9, these differences were attenuated and the average size of normal D-larvae varied inversely to the pH gradient. Possible underlying mechanisms for these complex response patterns are discussed, including the existence of phenotypic plasticity or genetic pre-adaptive capacity in this D. trunculus population to cope with future environmental changes.
- New species in aquaculture: are the striped venus clam Chamelea gallina (Linnaeus, 1758) and the surf clam Spisula solida (Linnaeus 1758) potential candidates for diversification in shellfish aquaculture?Publication . Joaquim, Sandra; Matias, Domitilia; Matias, Ana Margarete; Gonçalves, Rui; Chicharo, Luis; Gaspar, MiguelThe surf Spisula solida and the striped venus Chamelea gallina clams support important fisheries in Europe. These fisheries have been affected by inter-annual fluctuations in stock abundance and recruitment failures. Aquaculture could contribute to address these problems through the production of larvae or juveniles for stock-enhancement programmes. In the present study, the prerequisites to produce these species in hatchery were established. Of the different methods used to obtain gametes (thermal stimulation, scarification and flow through), C. gallina spawned in the flow through only. By its turn, the best method for obtaining gametes for S. solida was stripping. Higher survivals of D-larvae were found at 15 and 17 degrees C. The greatest larval survival and growth rates were obtained from larvae fed Isochrysis aff. galbana (T-iso). First C. gallina and S. solida pediveliger larvae were found at day 8 and day 26 respectively. The presence of metamorphosed larvae found even in the unfed treatment for C. gallina and for S. solida is an advantage for aquaculture production. After metamorphosis, the S. solida juveniles' survival was quite low, whereas there was no mortality for C. gallina juveniles reared without substrate regardless the diet provided. Juveniles fed the binary diet (Chaetoceros calcitrans - C. cal + T.iso) and the monodiet T-iso showed relatively higher growth in shell length and weight than C. cal. The hatchery production of these two species was possible, however the results of this study showed that C. gallina can be more attractive for aquaculture than S. solida.
- Rebuilding viable spawner patches of the overfished Spisula solida (Mollusca : Bivalvia): a preliminary contribution to fishery sustainabilityPublication . Joaquim, Sandra; Gaspar, Miguel; Matias, Domitilia; Ben-Hamadou, Radhouan; Arnold, William S.Populations of commercially important bivalves along the coast of Portugal are depleted as a consequence of natural and anthropogenic causes. A pilot experiment was designed to determine the feasibility of transplanting individuals from natural clam beds to a closed fishing area in an effort to rebuild relatively high-density patches of Spisula solida. For this purpose, clams were equally partitioned into two groups (undersize and legal clams) and transplanted at a density of 40 clams m(-2) into two areas 50 m(2). Transplanted and control clams were sampled to estimate survival, condition index, biochemical composition, and reproductive condition. Generally, the physiological condition of clams was not affected by the method of transplanting. One year after transplanting, survival was 45%. The increase in local abundance of mature clams should facilitate successful fertilization and increase the residual reproductive value of each clam relative to its pre-transplant value. Transplanting undersize clams may be more advantageous because they are more likely to spawn at least once before harvest. The experiments demonstrate that spawner transplants may strengthen S. solida populations and can be used in stock-enhancement programmes which, in conjunction with effective management measures, can contribute to the sustainability of the S. solida fishery.
- Relationships between broodstock condition, oocyte quality, and 24h D-larval survival during the spawning season of the pullet carpet shell Venerupis corrugata (Gmelin, 1791)Publication . Joaquim, Sandra; Matias, Domitília; Matias, Ana Margarete; Gonçalves, Rui; Vera, Cátia; Chícharo, Luís; Gaspar, MiguelVenerupis corrugata is commercially exploited in Europe. Over-fishing and recruitment failure is causing the decline of its populations and stock sustainability. Knowledge of this species reproduction is paramount to establish hatchery production of juveniles for restoring natural beds. This work aimed to find a relationship between broodstock condition, oocyte quality, and viability of 24h D-larvae. Adult specimens were induced to spawn by thermal stimulation. From each female, oocytes were taken for biochemical analyses (proteins, total lipids, and carbohydrates), and the remaining oocytes were fertilized. The 24h D-larval yield was calculated after embryo incubation. Spawning in the hatchery with 'wild' broodstock was possible for a long period, however, subsequent larval viability varied according to oocyte quality. Two distinct periods of spawning were recorded: in January/March, with a higher number of oocytes released, and in June/July with a lower response to the spawning stimulation, however with greater success in 24h D-larval survival. The condition index of broodstock and the total lipids of oocytes released can be used as benchmarks for estimating the success of D veliger larvae.