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The first radiation hybrid map of a perch-like fish: the gilthead seabream (Sparus aurata L)

2006Journal article Restricted access
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dc.contributor.authorSenger, Fabrice
dc.contributor.authorPriat, Catherine
dc.contributor.authorHitte, Christophe
dc.contributor.authorSarropoulou, Elena
dc.contributor.authorFranch, Rafaella
dc.contributor.authorGeisler, Robert
dc.contributor.authorBargelloni, Luca
dc.contributor.authorPower, Deborah
dc.contributor.authorGalibert, F.
dc.date.accessioned2014-10-24T10:41:25Z
dc.date.available2014-10-24T10:41:25Z
dc.date.issued2006
dc.description.abstractAmong Teleosts, Perciformes are the largest order of fishes and include numerous species of commercial importance. Perciformes also comprise species of primary interest for evolutionary studies and analysis of the sex determination systems and sex chromosome plasticity. Unfortunately, genomics tools and resources for Perciformes remain to be developed. Here, we report the production of a seabream whole-genome radiation hybrid (RH) panel in which quality was ascertained by the construction of a 2-Mb-resolution RH map. The map encompasses 440 markers (288 microsatellites, 82 gene-based markers, and 70 STS) suitable for linkage analysis and comparative mapping studies. Achievement of a RHpanel and a whole-genome RH map should contribute to establishing seabream as a fish model among the Perciformes and should be of importance in aquaculture for marker-assisted selection, improvement of growth performance, and disease management. Development of RH maps in a costeffective manner for other fishes with the described methodology will offer a powerful approach in aquaculture and will provide extended capabilities for comparing vertebrate genome evolution.por
dc.description.sponsorshipThis work was supported by the European Union under Framework Program 5 through the project “Bridge-Map No. Q5RS-2001-01797” coordinated by Georgios Kotoulas (Department of Genetics and Molecular Biotechnology, Institute of Marine Biology of Crete, P.O. Box 2214, Port of Iraklio, Iraklio, Crete, Greece). We acknowledge Francoise Vignaux for providing the CHO HPRT− cell line. We also acknowledge support from the Centre National Recherche Scientifique, the Université de Rennes 1, and the Pole de Calcul Intensif de l’Ouest for technical assistance.por
dc.identifier.citationFabrice Senger, Catherine Priat, Christophe Hitte, Elena Sarropoulou, Rafaella Franch, Robert Geisler, Luca Bargelloni, Deborah Power Francis Galibert, "The first radiation hybrid map of a perch-like fish: The gilthead seabream (Sparus aurata L)" in Genomics 87 (2006) 793–800.por
dc.identifier.doihttp://dx.doi.org/10.1016/j.ygeno.2005.11.019
dc.identifier.issn0888-7543
dc.identifier.otherAUT: DPO00386;
dc.identifier.urihttp://hdl.handle.net/10400.1/5464
dc.language.isoengpor
dc.peerreviewedyespor
dc.publisherElsevierpor
dc.subjectPerciformpor
dc.subjectSeabreampor
dc.subjectRH-panelpor
dc.subjectGenome mappor
dc.titleThe first radiation hybrid map of a perch-like fish: the gilthead seabream (Sparus aurata L)por
dc.typejournal article
dspace.entity.typePublication
oaire.citation.endPage800por
oaire.citation.startPage793por
oaire.citation.titleGenomicspor
oaire.citation.volume87por
person.familyNamePower
person.givenNameDeborah Mary
person.identifier.ciencia-id891A-8A44-3CAE
person.identifier.orcid0000-0003-1366-0246
person.identifier.scopus-author-id7101806760
rcaap.rightsrestrictedAccesspor
rcaap.typearticlepor
relation.isAuthorOfPublicationc68f5ffb-63f6-4c70-8957-29e464fb59c0
relation.isAuthorOfPublication.latestForDiscoveryc68f5ffb-63f6-4c70-8957-29e464fb59c0

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