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First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples

2025-03-12Journal article Open access
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dc.contributor.authorPavloudi, Christina
dc.contributor.authorSanti, Ioulia
dc.contributor.authorAzua, Iñigo
dc.contributor.authorBaña, Zuriñe
dc.contributor.authorBastianini, Mauro
dc.contributor.authorBelser, Caroline
dc.contributor.authorBilbao, Jone
dc.contributor.authorBitz-Thorsen, Julie
dc.contributor.authorBroudin, Caroline
dc.contributor.authorCamusat, Mathieu
dc.contributor.authorCancio, Ibon
dc.contributor.authorCaray-Counil, Louis
dc.contributor.authorCasotti, Raffaella
dc.contributor.authorCastel, Jade
dc.contributor.authorComtet, Thierry
dc.contributor.authorCox, Cymon
dc.contributor.authorDaguin, Claire
dc.contributor.authorCerio, Oihane Díaz de
dc.contributor.authorExter, Katrina
dc.contributor.authorFauvelot, Cécile
dc.contributor.authorFrada, Miguel
dc.contributor.authorGaland, Pierre
dc.contributor.authorGarczarek, Laurence
dc.contributor.authorFernández, Jose González
dc.contributor.authorGuillou, Laure
dc.contributor.authorHablützel, Pascal
dc.contributor.authorHeynderickx, Hanneloor
dc.contributor.authorHoubin, Céline
dc.contributor.authorKervella, Anne
dc.contributor.authorKrystallas, Apostolos
dc.contributor.authorLagaisse, Rune
dc.contributor.authorLaroquette, Arnaud
dc.contributor.authorLescure, Lyvia
dc.contributor.authorLopes, Eva
dc.contributor.authorLoulakaki, Melina
dc.contributor.authorLouro, Bruno
dc.contributor.authorMagalhaes, Catarina
dc.contributor.authorMaidanou, Maria
dc.contributor.authorMargiotta, Francesca
dc.contributor.authorMontresor, Marina
dc.contributor.authorNot, Fabrice
dc.contributor.authorParedes, Estefanía
dc.contributor.authorPercopo, Isabella
dc.contributor.authorPéru, Erwan
dc.contributor.authorPoulain, Julie
dc.contributor.authorPræbel, Kim
dc.contributor.authorRigaut-Jalabert, Fabienne
dc.contributor.authorRomac, Sarah
dc.contributor.authorStavroulaki, Melanthia
dc.contributor.authorTroncoso, Jesús Souza
dc.contributor.authorThiébaut, Eric
dc.contributor.authorThomas, Wilfried
dc.contributor.authorTkacz, Andrzej
dc.contributor.authorTrano, Anna Chiara
dc.contributor.authorWincker, Patrick
dc.contributor.authorPade, Nicolas
dc.date.accessioned2025-04-04T08:54:59Z
dc.date.available2025-04-04T08:54:59Z
dc.date.issued2025-03-12
dc.description.abstractThe European Marine Omics Biodiversity Observation Network (EMO BON) is an initiative of the European Marine Biological Resource Centre (EMBRC) to establish a persistent genomic observatory amongst designated European coastal marine sites, sharing the same protocols for sampling and data curation. Environmental samples are collected from the water column and, at some sites, soft sediments and hard substrates (Autonomous Reef Monitoring Structures- ARMS), together with a set of mandatory and discretionary metadata (including Essential Ocean Variables- EOVs). Samples are collected following standardised protocols at regular and specified intervals and sequenced in large six-monthly batches at a centralised sequencing facility. The use of standard operating procedures (SOPs) during data collection, library preparation and sequencing aims to provide uniformity amongstthe data collected from the sites. Coupled with strict adherence to open and FAIR (Findable, Accessible, Interoperable, Reusable) data principles, this ensures maximum comparability amongst samples and enhances reusability and interoperability of the data with other data sources. The observatory networkwas launched in June 2021, when the first sampling campaign took place.eng
dc.description.sponsorshipNR-10-INBS-0009; TED2021-132109B-C21
dc.identifier.doi10.3897/bdj.13.e143585
dc.identifier.eissn1314-2836
dc.identifier.issn1314-2828
dc.identifier.urihttp://hdl.handle.net/10400.1/26971
dc.language.isoeng
dc.peerreviewedyes
dc.publisherPensoft Publishers
dc.relation.ispartofBiodiversity Data Journal
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.titleFirst release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment sampleseng
dc.typejournal article
dspace.entity.typePublication
oaire.citation.startPagee143585
oaire.citation.titleBiodiversity Data Journal
oaire.citation.volume13
oaire.versionhttp://purl.org/coar/version/c_970fb48d4fbd8a85
person.familyNameCox
person.familyNameLouro
person.givenNameCymon
person.givenNameBruno
person.identifier.ciencia-id6B15-9771-1D04
person.identifier.orcid0000-0002-4927-979X
person.identifier.orcid0000-0001-8164-581X
person.identifier.ridD-1303-2012
person.identifier.scopus-author-id7402112716
person.identifier.scopus-author-id16028940200
relation.isAuthorOfPublication82c3689c-60b6-440d-9d7b-49e6dbd6861b
relation.isAuthorOfPublication3b22b64f-ba2d-4c42-8bf9-34b569eb7b6c
relation.isAuthorOfPublication.latestForDiscovery82c3689c-60b6-440d-9d7b-49e6dbd6861b

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